Any Apple Silicon Mac users using 10.8.13 or 10.9?

[gnattu]

There is indeed a bug in the migration code.

For current workaround, you can do this:

Go to ~/.local/share, move the jellyfin folder to ~/Library/Application Support/. Make sure that the jellyfin folder does not exit in ~/.local/share and is present in ~/Library/Application Support/.

You can go to these folders by pressing command+option+G and paste the path.

We will update the tray app soon so this never happens again

Many thanks, did your fix and it's now working. 

No it is really not. Please revert to the old location and download 10.9.1 for the proper way to make it work.

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10.9.1 is out and that uses an alternate approach.

If you have installed 10.8 and did the manual migration, please restore it to the original location (~/.local/share) then start 10.9.1

The appear to work manual migration does not actually makes your instance work.