Migrate from Docker Desktop to Native Windows

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You could try the migration script, but keep in mind it's not supported by the Jellyfin devs and may not work for Docker --> Windows. Depending on the size of your library, a fresh start may not be a bad thing.

https://jellyfin.org/docs/general/admini...n/migrate/

The location of transferrable files will be different on both platforms and a bit of a push to get right.