Fixing Metadata for an Anime

[Zeal514]

I have Inuysha on my server and imported the episodes to Sonarr, which created hardlinks, BUT the hardlinks are copying the exact same naming convetion, but in seasonal folders.  So it looks like this.

Code:

zeal@nasus:~/data/media/anime/InuYasha$ ls
backdrop.jpg  folder.jpg  'Season 2'  'Season 4'  'Season 6'
banner.jpg    'Season 1'  'Season 3'  'Season 5'  'Season 7'

Then here is season 1

Code:

zeal@nasus:~/data/media/anime/InuYasha/Season 1$ ls
'[a-s]_inuyasha_-_001__rs2_[F17820E3].mkv'  '[a-s]_inuyasha_-_015__rs2_[395F4702].mkv'
'[a-s]_inuyasha_-_002__rs2_[B9BFF92F].mkv'  '[a-s]_inuyasha_-_016__rs2_[4D2B6E2D].mkv'
'[a-s]_inuyasha_-_003__rs2_[2B067385].mkv'  '[a-s]_inuyasha_-_017__rs2_[B59A3EBD].mkv'
'[a-s]_inuyasha_-_004__rs2_[D567C1D1].mkv'  '[a-s]_inuyasha_-_018__rs2_[84D99CAC].mkv'
'[a-s]_inuyasha_-_005__rs2_[A3972E34].mkv'  '[a-s]_inuyasha_-_019__rs2_[B56E6591].mkv'
'[a-s]_inuyasha_-_006__rs2_[A027878E].mkv'  '[a-s]_inuyasha_-_020__rs2_[DBF52665].mkv'
'[a-s]_inuyasha_-_007__rs2_[1642B07D].mkv'  '[a-s]_inuyasha_-_021__rs2_[9F4C7E9C].mkv'
'[a-s]_inuyasha_-_008__rs2_[E9B1E39C].mkv'  '[a-s]_inuyasha_-_022__rs2_[80E1254E].mkv'
'[a-s]_inuyasha_-_009__rs2_[6907FD31].mkv'  '[a-s]_inuyasha_-_023__rs2_[FD3EAAB7].mkv'
'[a-s]_inuyasha_-_010__rs2_[82A90A96].mkv'  '[a-s]_inuyasha_-_024__rs2_[5628DCFE].mkv'
'[a-s]_inuyasha_-_011__rs2_[9A1AFF41].mkv'  '[a-s]_inuyasha_-_025__rs2_[4FEFD251].mkv'
'[a-s]_inuyasha_-_012__rs2_[103449B0].mkv'  '[a-s]_inuyasha_-_026__rs2_[FCDCF794].mkv'
'[a-s]_inuyasha_-_013__rs2_[6E9B5EC1].mkv'  '[a-s]_inuyasha_-_027__rs2_[301D1372].mkv'
'[a-s]_inuyasha_-_014__rs2_[2B66109A].mkv'  metadata

This leaves me with a few questions.

1. Can i delete the metadata from jellyfin gui?  It seems that it also deletes the files.  I mean i could delete the file 'metadata' idk if that would work.  My goal is to dictate to jellyfin to try and use a specific metadata db, to maybe fix it?  Like it'd be nice to just right click the series, and say "collect metadata from aniDB" or "AniList" etc.
   
2. What is the best way to rename the these files? I kinda got a issue here.  I was thinking of writing a script to rename the files, but not sure if i rename the hardlinked files if it will mess up sonar/hardlinks, but than if i rename the original files, I dont know if a script will work well because i'd have to go in and match each file in the torrent client.  I can't be the first person to have this issue, what is everyone else doing?