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[kc1]

For my future self ....

Looks like Jellyfin also doesn't like any .xml files or empty directories

having run :

find . -name "*.xml" -exec rm {} \;

and to find empty directories:

du -k .| sort -k 1 -n | grep "^4 "

It now finds most of the files (it has missed 28 out of the 12500 in the L-Z directory but that I can live with)

[TheDreadPirate]

Empty directories is a known bug/problem. I don't recall if that is fixed in 10.9.